Job Description Q2A0K9 Confidence 100.00% Date Thu Jan 5 12:33:36 GMT 2012 Rank 3 Aligned Residues 173 % Identity 18% Template d1j9aa_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.50

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		N	D	G	K	Q	Q	S	T	F	L	F	H	D	Y	E	T	F	G	T	H	P	A	L	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	.	.	.	.	.	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K
Query Conservation																																																						.	.	.	.	.
Alig confidence																																																						.	.	.	.	.
Template Conservation
Template Sequence		H	X	S	F	D	K	Q	N	L	I	W	I	D	L	E	X	T	G	L	D	P	E	K	E	R	I	I	E	I	A	T	I	V	T	D	K	N	L	N	I	L	A	E	G	P	V	L	A	V	H	Q	S	D	E	L	L	N	K	X	N	D	W	C	Q	K	T	H	S	E	N	G	L	I	E	R	I	K	A	S	K
Template Known Secondary structure			T	T			T	T										S	S	S		T	T	T													T	T	S									B		B									S	S												T						T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		G	E	N	E	A	A	F	A	A	R	I	H	S	L	F	T	V	.	.	.	.	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	L	D	V	M	R	A	C	Y	A	L	R	P	E	G	I	N
Query Conservation																			.	.	.	.
Alig confidence						.													.	.	.	.										.																			.	.	.	.	.	.	.																						.	.	.
Template Conservation						.																										.																			.	.	.	.	.	.	.																						.	.	.
Template Sequence		L	T	E	R	.	A	A	E	L	Q	T	L	D	F	L	K	K	W	V	P	K	G	A	S	P	I	C	G	N	S	.	I	A	Q	D	K	R	F	L	V	K	Y	X	P	D	L	A	D	Y	.	.	.	.	.	.	.	F	H	Y	R	H	L	D	V	S	T	L	K	E	L	A	A	R	W	K	P	E	.	.	.
Template Known Secondary structure		B				.											T	T	T	S		T	T	T	S					S	S	.																		S	.	.	.	.	.	.	.	S		S																	G	G	.	.	.
Template Predicted Secondary structure						.																										.																			.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		83	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	E	N	D	D	G	L	P	S	F	R	L	E	H	L	T	K	A	N	G	I	E	H	S	N	A	H	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R	Q	P	R	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	E	G	F	K	K	E	N	T	H	L	A	L	D	D	I	R	E	S	I	K	E	L	A	Y	Y	R	E	H	F	X	K	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G							S																				T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions