Job Description Q2A0K9 Confidence 92.48% Date Thu Jan 5 12:33:36 GMT 2012 Rank 51 Aligned Residues 127 % Identity 24% Template c3cymA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bad_0989; PDBTitle: crystal structure of protein bad_0989 from bifidobacterium2 adolescentis Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		L	F	H	D	Y	E	T	F	G	T	H	P	A	L	D	R	.	.	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K	G	E	N	E	A	A	F	A	A	R	I	H
Query Conservation																		.	.
Alig confidence																		.	.						.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		L	A	A	D	A	E	R	A	S	G	F	R	Y	G	H	E	D	W	L	V	Q	F	K	.	.	.	R	D	G	A	G	I	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	P	Q	A	L	A	A	A	G	A	D	W	.	N	D	F	N	R	A	V
Template Known Secondary structure										T	T	T	S	S	S										.	.	.			T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T				.
Template Predicted Secondary structure																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.																										70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	F	T	V	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	L	D	V	M	R	A	C	Y	A	L	R	P	E	G	I	N	W	P	E	N	D	D	G	L	P	S	F	R	L	E	H	L
Query Conservation
Alig confidence		.	.	.	.	.										.											.	.	.	.								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.										.											.	.	.	.								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	G	D	A	V	W	I	L	H	D	.	S	L	Q	D	L	P	G	F	D	E	.	.	.	.	L	G	M	E	P	Q	R	.	.	.	.	.	.	.	.	.	.	.	L	F	D	T	E	I	A	A	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	G	L	K	R	F	G	L	A	A	V
Template Known Secondary structure		.	.	.	.	.	T	T						S	S	.											.	.	.	.		T						.	.	.	.	.	.	.	.	.	.	.											T	.	.	.	.	.	.	.	.	.	.	.	.	T		S	S		S
Template Predicted Secondary structure		.	.	.	.	.										.											.	.	.	.								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.													.	.	.	130	.	.	.	.	.	.
		170	.	.	.																		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	E	H	S	N	A	H	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	H	F	L	G	L	T	L	A	K	E	H	S	A	A	D	W	S	Y	R	P	L	P	R	D	W	R	N	Y	A	A	L	D	V	E	L	L	I	E	L	E	T	K	M	R	A	E
Template Known Secondary structure															T	T			T	T		S	S															T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions