Job Description Q2A0K9 Confidence 99.96% Date Thu Jan 5 12:33:36 GMT 2012 Rank 15 Aligned Residues 172 % Identity 13% Template c1zbhA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:3'-5' exonuclease eri1; PDBTitle: 3'-end specific recognition of histone mrna stem-loop by 3'-2 exonuclease Resolution 3.00 Å

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		9	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		S	T	F	L	F	H	D	Y	E	T	F	.	.	.	.	G	T	H	P	A	L	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K	G	E	N	E	A	A	F
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																																																															.
Template Conservation																																																																															.
Template Sequence		D	Y	I	C	I	I	D	F	E	A	T	C	E	E	G	N	P	P	E	F	V	H	E	I	I	E	F	P	V	V	L	L	N	T	H	T	L	E	I	E	D	T	F	Q	Q	Y	V	R	P	E	I	N	T	Q	L	S	D	F	C	I	S	L	T	G	I	T	Q	D	Q	V	D	R	A	D	T	F	P	.	Q	V
Template Known Secondary structure		S													T	T			T	T															T	T	T											B			S	S	S		S																		T	S	B				.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.
		85	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																		.												.	.
Query SS confidence											.	.	.	.	.																		.												.	.
Query Sequence		A	A	R	I	H	S	L	F	T	.	.	.	.	.	V	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	.	V	T	R	N	I	F	Y	R	N	F	Y	.	.	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	L	D	V	M	R	A	C	Y	A	L	R	P	E	G	I	N	W	P	E
Query Conservation											.	.	.	.	.																		.												.	.
Alig confidence											.	.	.	.	.												.						.												.	.								.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation																											.																											.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Sequence		L	K	K	V	I	D	L	M	K	L	K	E	L	G	T	K	Y	K	Y	S	L	L	T	D	G	.	S	W	D	M	S	K	F	L	N	I	Q	C	Q	L	S	R	L	K	Y	P	P	F	A	K	K	W	.	.	.	.	.	.	.	.	.	I	N	I	R	K	S	Y	G	N	F	Y	K	V	.	.	.	.	.	.
Template Known Secondary structure												T	T	B	T	T	T	B							S	S	.	S					T									T	T	B				G	G	G	S			.	.	.	.	.	.	.	.	.												T		.	.	.	.	.	.
Template Predicted Secondary structure																											.																											.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.										.	.	260	.	.	.	.	.	.	.	.	.	270
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		N	D	D	G	L	P	S	F	R	L	E	H	L	T	K	A	N	G	I	E	H	S	.	N	A	H	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R
Query Conservation																								.
Alig confidence		.	.	.																				.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	R	S	Q	T	K	L	T	I	M	L	E	K	L	G	M	D	Y	D	G	R	P	N	C	G	L	D	D	S	K	N	I	A	R	I	A	V	R	M	L	Q	D
Template Known Secondary structure		.	.	.		G	G	G		S								T	T					S		T	T																			T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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