Job Description P0A780 Confidence 2.45% Date Thu Jan 5 11:05:01 GMT 2012 Rank 86 Aligned Residues 92 % Identity 12% Template c3rk6A_ PDB info PDB header:translation regulator Chain: A: PDB Molecule:polyadenylate-binding protein-interacting protein 1; PDBTitle: crystal structure of the middle domain of human paip1 Resolution 2.00 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		V	L	Y	F	R	E	L	L	A	G	V	A	T	N	T	A	Y	L	D	G	L	M	K	P	Y	L	S	R	L	L	E	E	L	G	Q	V	E	K	A	V	L	R	I	A	L	Y	E	L	S	K	R	S	D	V	P	Y	K	V	A	I	N	E	A	I	E	L	A	K	S	F	.	.	.	.	.	G	A	E	D	S
Query Conservation																																																																								.	.	.	.	.
Alig confidence																																									.	.	.																													.	.	.	.	.
Template Conservation																																									.	.	.
Template Sequence		S	E	Y	V	Q	D	F	L	N	H	L	T	E	Q	P	G	S	F	E	T	E	I	E	Q	F	A	E	T	L	N	G	C	V	T	T	D	D	A	L	.	.	.	Q	E	L	V	E	L	I	Y	Q	Q	A	T	S	I	P	N	F	S	Y	M	G	A	R	L	C	N	Y	L	S	H	H	L	T	I	S	P	Q	S
Template Known Secondary structure																G	G	G																		S					.	.	.													S	S	T	T																					T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	F	V	N	G	V	L	D	K	A	A	P	V	I	R	P	N	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	F	R	Q	L	L	L	Q	R	C	R	T	E	Y	E	V	K	D	Q
Template Known Secondary structure																	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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