Job Description P0A780 Confidence 2.65% Date Thu Jan 5 11:05:01 GMT 2012 Rank 75 Aligned Residues 75 % Identity 12% Template c1wmwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranylgeranyl diphosphate synthetase; PDBTitle: crystal structure of geranulgeranyl diphosphate synthase from thermus2 thermophilus Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	D	V	D	V	L	Y	F	R	E	L	L	A	G	V	A	T	N	T	A	Y	L	D	G	L	M	K	P	Y	L	S	R	L	L	E	E	L	G	Q	V	E	K	A	V	L	R	I	A	L	Y	E	L	S	K	R	S	D	V	P	Y	K	V	A	I	N	E	A	I	E	L	A	K	S	F	G
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		M	V	P	A	P	E	A	I	R	Q	A	L	Q	E	R	L	L	A	R	L	D	H	P	D	P	L	Y	R	D	L	L	Q	D	Y	P	R	R	G	G	K	M	L	R	G	L	L	T	V	Y	S	A	L	A	.	H	G	A	P	L	E	A	G	L	E	A	A	T	A	L	E	L	F	Q	N	W	V
Template Known Secondary structure																					T			S	S													T																	.	T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions