Return to main results Retrieve Phyre Job Id

Job DescriptionP37349
Confidence98.54%DateThu Jan 5 11:55:28 GMT 2012
Rank31Aligned Residues118
% Identity14%Templated1pdoa_
SCOP infoPTS system fructose IIA component-like PTS system fructose IIA component-like EIIA-man component-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70. ........80
Predicted Secondary structure 



























.
Query SS confidence 





































































.








Query Sequence  VNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDM. GSALLSAET
Query Conservation 








  

 
  

  

     
 
  


  
     

    
  

       

 
  

.


    
 
Alig confidence 








.













.















..


























.








Template Conservation 
 


 


.  
 

  
   
 .
    
  
       ..       
   
        






 



 
 
 
Template Sequence  IAIVIGTHG. WAAEQLLKTAEMLL. GEQENVGWIDFVPGEN. . AETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAAS
Template Known Secondary structure 

SB.T.


SS
B
TT

..TTS

TT
SSTTS
Template Predicted Secondary structure 


.

.










..










Template SS confidence 















































































   3......10. ........20..... ....30.........40. ........50.........60.........70........
 
   81........90.........100.........110.........120.......
Predicted Secondary structure 














Query SS confidence 














































Query Sequence  ALELLAPEIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHA
Query Conservation 
 
 
       
    





  



 
  
  
  
   
  
Alig confidence 


....







































Template Conservation     ....       











            

       
Template Sequence  RIV. . . . VDKEHYEVIAGVNIPMLVETLMARDDDPSFDELVALAVET
Template Known Secondary structure  ....TT
TTS

TT


Template Predicted Secondary structure  ....











Template SS confidence 














































   7980. ........90.........100.........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions