 |
Job Description | P37349 | Confidence | 39.83% | Date | Thu Jan 5 11:55:28 GMT 2012 |
Rank | 79 | Aligned Residues | 54 |
% Identity | 17% | Template | d1cf7b_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Cell cycle transcription factor e2f-dp
|
Resolution | 2.60 |
|
  |   |
327 | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | A | A | A | S | E | L | L | Q | H | E | H | C | T | A | E | Y | A | W | Q | Q | V | L | K | E | L | S | Q | Q | Y | Q | Q | L | D | D | E | Y | L | Q | A | R | Y | I | D | V | D | D | L | L | H | R | T | L | V | H | L |
Query Conservation |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|   |
|   |   |
|   |   |
| . | . | . |
|
|   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
F | S | M | K | V | C | E | K | V | Q | R | K | G | T | T | . |
. |
. |
S | Y | N | E | V | A | D | E | L | V | S | E | F | T | N | S | N | N | H | L | A | A | D | S | A | Y | D | Q | K | N | I | R | R | R | V | Y | D | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | S |  |  | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |
|
| G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|