Job Description P37349 Confidence 99.85% Date Thu Jan 5 11:55:28 GMT 2012 Rank 8 Aligned Residues 119 % Identity 13% Template c3gdwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma-54 interaction domain protein; PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		V	N	L	V	I	V	S	H	S	S	R	L	G	E	G	V	G	E	L	A	R	Q	M	L	M	S	D	S	C	K	I	A	I	A	A	G	I	D	D	P	Q	N	P	I	G	T	D	A	V	K	V	M	E	A	I	.	.	E	S	V	A	D	A	D	H	V	L	V	M	M	D	M	G	S	A	L	L	S	A	E
Query Conservation																																																									.	.
Alig confidence																									.	.																	.	.													.	.
Template Conservation																									.	.																	.	.
Template Sequence		V	G	V	F	V	L	X	H	G	D	S	T	A	S	S	X	L	K	T	A	Q	E	L	.	.	L	G	T	S	I	G	T	A	X	N	X	P	L	T	X	E	.	.	V	Q	T	X	Y	E	Q	L	R	N	Q	V	I	T	Q	K	E	S	L	N	N	G	I	L	L	L	T	D	X	G	S	L	N	S	F	G	N
Template Known Secondary structure										S	S	S													.	.		T											T	T	S		.	.														T	S	T	G	G	G	T	T								S	G	G	G	G	G
Template Predicted Secondary structure																									.	.																	.	.
Template SS confidence
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.			.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.			.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	E	L	L	A	P	E	I	A	A	K	V	R	L	C	A	A	P	L	V	E	G	T	L	A	A	T	V	S	A	A	S	G	A	D	I	D	K	V	I	F	D	A	M	H	A	L
Query Conservation
Alig confidence											.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		X	L	F	E	E	T	G	I	R	.	.	.	.	T	K	A	I	T	X	T	S	T	X	I	V	L	E	A	I	R	X	A	S	V	G	R	S	L	E	D	I	Y	Q	N	I	Q	L	S	F
Template Known Secondary structure											.	.	.	.						S															T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		621	.	.	.	.	.	.	.	.					630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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