Return to main results Retrieve Phyre Job Id

Job DescriptionP37349
Confidence54.18%DateThu Jan 5 11:55:28 GMT 2012
Rank60Aligned Residues75
% Identity21%Templatec2dt8A_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:degv family protein; PDBTitle: fatty acid binding of a degv family protein from thermus thermophilus
Resolution1.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50......... 60......... 70.........80.........90....... ..100.........110........
Predicted Secondary structure 

.




...











.....





Query SS confidence 











.









. . .



























. . . . .




















Query Sequence  DAVKVMEAIESV. ADADHVLVMM. . . DMGSALLSAETALELLAPEIAAKVRLCA. . . . . APLVEGTLAATVSAASGADID
Query Conservation      
  

   .    

 
  ...




    
 
 
 
       
    .....





  



 
  
  
 
Alig confidence 











.









...

















....





.....




















Template Conservation 
          
      

 
 


 




  
  

     .... 
 



       
  
  
      
 
  
Template Sequence  SPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAAQEFPG. . . . RVTVVDTQAASLGVGXXVLRAKELLEEGQSLE
Template Known Secondary structure 
TTS
SS
TTT
TTTSTT....S
S

TT

Template Predicted Secondary structure 











....







Template SS confidence 















































































   65....70.........80.........90.........100........ .110.........120.........130.........140
 
   119120......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  KVIFDAMH
Query Conservation   
   
  
Alig confidence 







Template Conservation 

   
  
Template Sequence  AVLAELER
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   141.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions