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Job DescriptionP64572
Confidence99.63%DateThu Jan 5 12:09:33 GMT 2012
Rank27Aligned Residues171
% Identity20%Templatec3tlxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:adenylate kinase 2; PDBTitle: crystal structure of pf10_0086, adenylate kinase from plasmodium2 falciparum
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50. ........60.........70.........80.........90....
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Query Sequence  NYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQT. . . ERRYLGLLSGEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTK
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Template Sequence  SKPDGRYIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVD. . . . . . . . . . . . . . . .
Template Known Secondary structure  TS



TTSS

TTSSSTT



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   25....30.........40.........50.........60.........70.........80........
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  SPALWAAVIMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMFLAQRERRLYQQMAQ
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Template Sequence  . . . . . . . . . . . . . DQMVLSLVDEKLKTPQCKKGFILDGYPRNVKQA. . . . . . . . . . . . . . . . . . EDLNKLLQKN. . . . . Q
Template Known Secondary structure  .............TTSGGGSSS


S..................T.....T
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   8990.........100.........110.........120. ........130. .
 
   175....180.........190... ......200.........210...
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Query Sequence  YRPELIIRLGIDIETAISR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KPDHDYAELQDKIGVMSKIG. . . . .
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Template Sequence  TKLDGVFYFNVPDEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEPLIQREDDNEDVLKKRLTVFKSETSPLIS
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TTTTTTTTB

SSTTB
TTT

B
B

GGGSTT
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   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   214.....220.........230.........240
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Query Sequence  . . YNGTKILEIDSRAPYSEVLEQAQKAVS
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Template Sequence  YYKNKNLLINLDATQPANDLEKKISQHID
Template Known Secondary structure  TT
TTS
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   213......220.........230.........240.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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