Job Description P64572 Confidence 99.13% Date Thu Jan 5 12:09:33 GMT 2012 Rank 79 Aligned Residues 180 % Identity 18% Template c3r8cB_ PDB info PDB header:transferase Chain: B: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of cytidylate kinase (cmk) from mycobacterium2 abscessus Resolution 2.20 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.														.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	I	A	V	V	G	C	D	G	T	G	K	S	T	L	T	T	D	L	V	K	S	L	Q	Q	H	W	Q	T	E	R	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	L	L	S	G	E	D	G	D	K	I	K	R	L	P	L	V	G	V	W	L	E	R	R	L	A	A	K	S	S	K	T
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		M	V	V	A	V	D	G	P	S	G	T	G	K	S	S	V	A	K	E	L	A	R	Q	L	.	.	.	G	A	S	Y	L	D	T	G	A	M	Y	R	I	V	T	L	W	V	L	R	A	G	V	D	L	T	D	P	A	A	I	A	A	A	T	D	Q	V	P	M	S	V	S	S	D	P	D	A	Q	T	A	L	L
Template Known Secondary structure										S	S	S	S												T	.	.	.	T																					T			T	T								T	T	T	T									T	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		Q	S	M	K	T	K	S	P	A	L	W	A	A	V	I	M	Y	C	.	.	.	.	.	.	F	S	L	R	R	M	A	N	L	R	K	V	Q	R	L	A	Q	S	G	V	L	V	V	S	D	R	F	P	Q	A	E	I	S	G	F	Y	Y	D	G	P	G	I	G	V	E	R	A	T	G	K	I	S	M	F	L	A
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	E	D	V	S	V	P	I	R	G	N	E	V	T	G	A	V	S	A	V	S	A	V	P	A	V	R	E	R	L	V	R	Q	Q	R	E	L	A	E	S	S	G	A	V	V	V	E	G	R	D	I	G	T	V	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T				T	T	G	G	G	S												T	S																	T	T	S	S					S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		Q	R	E	R	R	L	Y	Q	Q	M	A	Q	Y	R	P	E	L	I	I	R	L	G	I	D	I	E	T	A	I	S	R	K	P	D	H	D	Y	A	E	.	.	L	Q	D	K	I	G	V	M	S	K	I	G	Y	N	G	T	K	I	L	E	I	D	S	R	A	P	Y	S	E	V	L	E	Q	A	Q	K	A	V
Query Conservation																																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	P	D	A	D	V	K	I	Y	L	T	A	S	A	Q	A	R	A	Q	R	R	N	L	A	D	V	Q	R	R	D	H	L	D	S	T	R	A	V	S	P	L	R	P	A	E	D	A	L	E	V	D	T	S	D	M	T	Q	E	Q	V	V	A	H	L	L	D	L	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T	T		S																																S	S	S						T	T							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions