Job Description P64572 Confidence 99.00% Date Thu Jan 5 12:09:33 GMT 2012 Rank 90 Aligned Residues 184 % Identity 15% Template c3asyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridine kinase; PDBTitle: ligand-free structure of uridine kinase from thermus thermophilus hb8 Resolution 2.40 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	G	L	I	A	V	V	G	C	D	G	T	G	K	S	T	L	T	T	D	L	V	K	S	L	Q	Q	H	W	Q	T	E	R	R	Y	L	G	L	L	S	G	E	D	G	D	K	I	K	R	L	P	L	V	G	V	W	L	E	R	R	L	A	A	K	S	S	K	T	Q	S	M	K	T	K	S	P	A	L	W
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	F	V	I	G	I	A	G	G	T	A	S	G	K	T	T	L	A	Q	A	L	A	R	T	L	G	E	R	V	A	L	L	P	M	D	H	Y	Y	K	D	L	G	H	L	P	L	E	E	R	L	R	V	N	Y	D	H	P	D	A	F	D	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T	S	S													G	G	G						G	G	G		B				T	T	S		T	T	S	S	S	S	S		T	T	S	G	G	G	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	I	M	Y	C	F	S	L	R	R	M	A	N	L	R	K	V	Q	R	L	A	Q	S	G	V	L	V	V	S	D	R	F	P	Q	A	E	I	S	G	F	Y	Y	D	G	P	G	I	G	V	E	R	A	T	G	K	I	S	M	F	L	A	Q	R	E	R	R	L	Y	Q	Q	M	A	Q	Y	R	P	E	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	L	E	H	A	Q	A	L	L	R	G	L	P	V	E	M	P	V	Y	D	F	R	A	Y	T	R	S	P	R	R	T	P	V	R	P	A	P	V	V	I	L	E	G	I	L	V	L	Y	P	K	E	L	R	.	.	.	.	.	.	.	D	L	M	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T										T	T	T	T													S						S	T	T	T	T	S	S					.	.	.	.	.	.	.	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template SS confidence
																69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	R	L	G	I	D	I	E	T	A	I	S	R	K	P	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	A	E	L	Q	D	K	I	G	V	M	S	K	I	G	Y	N	G	T	K	I	L	E	I	D	S	R	A	P	Y	S	E	V	L	E	Q	A	Q	K	A	V	S
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	F	V	D	A	D	A	D	E	R	F	I	R	R	L	K	R	D	V	L	E	R	G	R	S	L	E	G	V	V	A	Q	Y	L	E	Q	V	K	P	M	H	L	H	F	V	E	P	T	K	R	Y	A	D	V	I	V	P	R	G	G	Q	N	P	V	A	L	E	M	L	A	A	K	A	L	A
Template Known Secondary structure																							T	S														T								T	T	G	G	G	G	G	G		S					S	T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions