Job Description P64572 Confidence 99.58% Date Thu Jan 5 12:09:33 GMT 2012 Rank 37 Aligned Residues 181 % Identity 12% Template c3akcA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of cmp kinase in complex with cdp and adp from2 thermus thermophilus hb8 Resolution 1.65 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	I	A	V	V	G	C	D	G	T	G	K	S	T	L	T	T	D	L	V	K	S	L	Q	Q	H	W	Q	T	E	R	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	L	L	S	G	E	D	G	D	K	I	K	R	L	P	L	V	G	V	W	L	E	R	R	L	A	A	K	S	S
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		G	I	V	T	I	D	G	P	S	A	S	G	K	S	S	V	A	R	R	V	A	A	A	L	.	.	.	G	V	P	Y	L	S	S	G	L	L	Y	R	A	A	A	F	L	A	L	R	A	G	V	D	P	G	D	E	E	G	L	L	A	L	L	E	G	L	G	V	R	L	L	A	Q	A	E	G	N	R	V	L	A
Template Known Secondary structure		S							S	T	T	S	S													.	.	.	T																					T			T	T													T							T	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	Q	S	M	K	T	K	S	P	A	L	W	A	A	V	I	M	Y	C	F	S	L	R	R	M	A	N	L	R	K	V	Q	R	L	A	Q	S	G	V	L	V	V	S	D	R	F	P	Q	A	E	I	S	G	F	Y	Y	D	G	P	G	I	G	V	E	R	A	T	G	K	I	S	M	F	L	A	Q	R	E	R
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	E	D	L	T	S	F	L	H	T	P	E	V	D	R	V	V	S	A	V	A	R	L	P	G	V	R	A	W	V	N	R	R	L	K	E	V	P	P	P	F	V	A	E	G	R	D	M	G	T	A	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T				G	G	G	S	S	S												T														T	S		S							S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.																												.
Query SS confidence																																		.	.	.	.	.	.	.																												.
Query Sequence		R	L	Y	Q	Q	M	A	Q	Y	R	P	E	L	I	I	R	L	G	I	D	I	E	T	A	I	S	R	K	P	D	H	D	.	.	.	.	.	.	.	Y	A	E	L	Q	D	K	I	G	V	M	S	K	I	G	Y	N	G	T	K	I	L	E	I	D	S	R	.	A	P	Y	S	E	V	L	E	Q	A	Q	K	A
Query Conservation																																		.	.	.	.	.	.	.																												.
Alig confidence		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.																												.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	P	E	A	A	H	K	F	Y	L	T	A	S	P	E	V	R	A	W	R	R	A	R	E	R	P	Q	A	Y	E	E	V	L	R	D	L	L	R	R	D	E	R	D	K	A	Q	S	A	P	A	P	D	A	L	V	L	D	T	G	G	M	T	L	D	E	V	V	A	W	V	L	A	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T		S																		T	T	S	S	S																T	G	G	G					T	T							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		239
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		206

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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