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Job DescriptionP64572
Confidence99.52%DateThu Jan 5 12:09:33 GMT 2012
Rank46Aligned Residues173
% Identity21%Templatec2ak2A_
PDB info PDB header:phosphotransferaseChain: A: PDB Molecule:adenylate kinase isoenzyme-2; PDBTitle: adenylate kinase isoenzyme-2
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  PGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWA
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Template Sequence  GVRAVLLGPPGAGKGTQAPKLAKNF. . . CVCHLA. . . . . . . . TGDMLRAMVASGS. . . . . . . . . . . . . . . . . . . . . . . . .
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TTSST...T
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   16...20.........30.........40 ...... ...50.........
 
   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  AVIMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMFLAQRERRLYQQMAQYRPELI
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Template Sequence  . . . . . . . . . . . . . ELGKKLKATMDAGKLVSDEMVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSV
Template Known Secondary structure  .............TT



TSGGGTT
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   60.........70.........80.........90.........100.........110.........120......
 
   181........190........ .200.........210.......
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Query Sequence  IRLGIDIETAISRKPDHD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YAELQDKIGVMSKIGYNGT
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Template Sequence  IEFSIPDSLLIRRITGRLIHPQSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNKKALKIRLEAYHTQTTPLVEYYSKRG
Template Known Secondary structure 

T

TTT

BTTTB

SSTTB
TTT

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TT
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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   218.220.........230.........240..
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Query Sequence  KILEIDSRAPYSEVLEQAQKAVSLV
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Template Sequence  IHSAIDASQTPDVVFASILAAFSKA
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TTS
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   207..210.........220.........230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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