Job Description P64572 Confidence 98.80% Date Thu Jan 5 12:09:33 GMT 2012 Rank 99 Aligned Residues 159 % Identity 19% Template c1xnjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate PDBTitle: aps complex of human paps synthetase 1 Resolution 1.98 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	N	Y	I	P	G	L	I	A	V	V	G	C	D	G	T	G	K	S	T	L	T	T	D	L	V	K	S	L	Q	Q	H	W	Q	T	E	R	R	Y	L	G	L	L	S	G	E	D	G	D	K	I	K	R	L	P	L	V	G	V	W	L	E	R	R	L	A	A	K	S	S	K	T	Q	S	M	K	T	K	S
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	G	F	R	G	C	T	V	W	L	T	G	L	S	G	A	G	K	T	T	V	S	M	A	L	E	E	Y	L	V	C	H	G	I	P	C	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	G	D	N	I	R	Q	G	L	N	K	N	L	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		S											S	T	T	S	S															T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T						T	T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.																		.	.	.	.	90	.	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		P	A	L	W	A	A	V	I	M	Y	C	F	S	L	R	R	M	A	N	L	R	.	.	.	.	K	V	Q	R	L	A	Q	S	G	V	L	V	V	S	D	R	F	P	Q	A	E	I	S	G	F	Y	Y	D	G	P	G	I	G	V	E	R	A	T	G	K	I	S	M	F	L	A	Q	R	E	R	R	L	Y	Q	Q
Query Conservation																							.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.													.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	F	S	P	E	D	R	E	E	N	V	R	R	I	A	E	V	A	K	L	F	A	D	A	G	L	V	C	I	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	S	P	Y	T	Q	D	R	N	N	A	R	Q	I	H	E	G	A	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		S	S	T	T																				T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	Q	Y	R	P	E	L	I	I	R	L	G	I	D	I	E	T	A	I	S	R	K	P	D	H	D	Y	A	E	L	Q	D	K	I	G	V	M	S	K	I	G	Y	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	I	L	E	I	D	S	R	A	P	Y	S	E	V	L	E	Q
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																							.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	S	L	P	F	F	E	V	F	V	D	A	P	L	H	V	C	E	Q	R	D	V	K	.	.	.	.	.	.	.	.	.	.	.	G	L	Y	K	K	A	R	A	G	E	I	K	G	F	T	G	I	D	S	E	Y	E	K	P	E	A	P	E	L	V	L	K	T	D	S	C	D	V	N	D	C	V	Q	Q
Template Known Secondary structure		.	.	.	T																				T	T	.	.	.	.	.	.	.	.	.	.	.	S							S	S		S	S	S		B	T	T	T	B						S	S		S					T	T	S	S
Template Predicted Secondary structure		.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.												.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	K	A	V	S	L	V	A	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	E	L	L	Q	E	R	D	I	V
Template Known Secondary structure									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions