Job Description P64572 Confidence 99.59% Date Thu Jan 5 12:09:33 GMT 2012 Rank 34 Aligned Residues 161 % Identity 13% Template c1lw7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcriptional regulator nadr; PDBTitle: nadr protein from haemophilus influenzae Resolution 2.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	V	G	C	D	G	T	G	K	S	T	L	T	T	D	L	V	K	S	L	Q	Q	H	W	Q	T	E	R	R	Y	L	G	L	L	S	G	E	D	G	D	K	I	K	R	L	P	L	V	G	V	W	L	E	R	R	L	A	A	K	S	S	K	T	Q	S	M	K	T	K	S	P	A	L	W	A	A	V	I
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	I	L	G	G	E	S	S	G	K	S	V	L	V	N	K	L	A	A	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	T	S	A	W	E	Y	G	R	E	F	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	L	G	G	D	E	Q	A	M	Q	Y
Template Known Secondary structure								T	T	S													T	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	S		T	T	S	S		T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250														.	.	.	.	.	.	.	.	.	260	.	.	.	.																				.	.	.	.	.	270	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	C	F	S	L	R	R	M	A	N	L	R	K	V	Q	R	L	A	Q	S	G	V	L	V	V	S	D	R	F	P	Q	A	E	I	S	G	F	Y	Y	D	G	P	G	I	G	V	E	R	A	T	G	K	I	S	M	F	L	A	Q	R	E	R	R	L	Y	Q	Q	M	A	Q	Y	R	P	E	L	I	I	R	L
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	Y	P	Q	X	A	L	G	H	Q	R	Y	I	D	Y	A	V	R	H	S	H	K	I	A	F	I	D	T	D	F	I	T	T	Q	A	F	C	I	Q	Y	E	G	K	A	H	P	F	L	D	S	X	I	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	F	D	V	T	I	L	L
Template Known Secondary structure		T	T																				S	S					S	S														S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.																	.	.	.	.	.	.	.	.	340
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	I	E	T	A	I	S	R	K	P	D	H	D	Y	A	E	L	Q	D	K	I	G	V	M	S	K	I	G	Y	N	G	T	K	I	L	E	I	D	S	R	A	P	Y	S	E	V	L	E	Q	A	Q	K	A	V	S	L	V
Query Conservation
Alig confidence					.	.	.	.	.	.	.																				.	.											.
Template Conservation					.	.	.	.	.	.	.																				.	.											.
Template Sequence		K	N	N	.	.	.	.	.	.	.	T	E	Q	K	Q	R	Q	Q	F	Q	Q	L	L	K	K	L	L	D	K	.	.	Y	K	V	P	Y	I	E	I	E	S	.	P	S	Y	L	D	R	Y	N	Q	V	K	A	V	I	E	K	V
Template Known Secondary structure					.	.	.	.	.	.	.					S														G	.	.	G	G									.	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.																				.	.											.
Template SS confidence
		341	.	.								.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions