Job Description A5PFJ8 Confidence 90.76% Date Thu Jan 5 10:55:34 GMT 2012 Rank 25 Aligned Residues 56 % Identity 9% Template d1ylfa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.50

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	L	H	F	C	E	N	P	G	K	I	Q	S	R	A	E	L	L	K	K	M	T	G	R	E	L	K	P	H	D	R	T	V	D	V	T	I	R	R	I	R	K	H	F	E	S	T	P	D	T	P	E	I	I	A	T	I	H	G	E	G	Y	R	F	C	G	D	L	E	D
Query Conservation
Alig confidence																								.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Template Conservation																								.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Template Sequence		I	L	S	I	L	K	N	N	P	S	S	L	C	T	S	D	Y	X	A	E	S	V	.	.	.	.	.	N	T	N	P	V	V	I	R	K	I	X	S	Y	L	K	Q	A	G	.	.	.	.	.	.	.	.	F	V	Y	V	.	.	N	G	G	A	G	L	L	K	D	L	H	E
Template Known Secondary structure									S		G	G	G											.	.	.	.	.	T	S															T	T	.	.	.	.	.	.	.	.	S				.	.							S	S		G	G	G
Template Predicted Secondary structure																								.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions