Return to main results Retrieve Phyre Job Id

Job DescriptionA5PFJ8
Confidence11.48%DateThu Jan 5 10:55:34 GMT 2012
Rank65Aligned Residues44
% Identity11%Templated1mzba_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain FUR-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40....
Predicted Secondary structure 

















Query SS confidence 











































Query Sequence  AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKH
Query Conservation   
  
    
 




 
   

          
   
  



Alig confidence 











































Template Conservation   

  
       

 

   
      

 




 
  
   
Template Sequence  KILQMLDSAQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAA
Template Known Secondary structure 



SB
TT



Template Predicted Secondary structure 











Template SS confidence 











































   20.........30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions