Job Description A5PFJ8 Confidence 87.00% Date Thu Jan 5 10:55:34 GMT 2012 Rank 27 Aligned Residues 58 % Identity 21% Template c3lwfD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution Resolution 2.06 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure											.																																																				.	.
Query SS confidence											.																																																				.	.
Query Sequence		A	M	L	H	F	C	E	N	P	.	G	K	I	Q	S	R	A	E	L	L	K	K	M	T	G	R	E	L	K	P	H	D	R	T	V	D	V	T	I	R	R	I	R	K	H	F	E	S	T	P	D	T	P	E	I	I	A	T	I	H	G	.	.	E	G	Y	R	F	C	G	D	L	E	D
Query Conservation											.																																																				.	.
Alig confidence											.														.	.	.	.	.																			.	.	.	.	.	.	.	.								.	.
Template Conservation																									.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		I	T	L	E	L	A	K	R	I	G	D	G	P	I	S	L	R	S	I	A	Q	D	K	.	.	.	.	.	N	L	S	E	H	Y	L	E	Q	L	I	G	P	L	R	N	A	G	.	.	.	.	.	.	.	.	I	V	K	S	I	R	G	A	H	G	G	Y	V	L	N	G	D	P	E	K
Template Known Secondary structure									T	T	T	S			B										.	.	.	.	.	T																T	T	.	.	.	.	.	.	.	.	S						S	T	T							S		T	T	T
Template Predicted Secondary structure																									.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions