Job Description A5PFJ8 Confidence 7.95% Date Thu Jan 5 10:55:34 GMT 2012 Rank 79 Aligned Residues 58 % Identity 17% Template c3kz4A_ PDB info PDB header:virus Chain: A: PDB Molecule:inner capsid protein vp2; PDBTitle: crystal structure of the rotavirus double layered particle Resolution 3.80 Å

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		7	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		E	N	P	G	K	I	Q	S	R	A	.	.	E	L	L	K	K	M	T	G	R	E	L	K	P	H	D	R	T	V	D	V	T	I	R	R	I	R	K	H	F	E	S	T	P	D	T	P	E	I	I	A	T	I	H	G	E	G	Y	R	F	C
Query Conservation												.	.
Alig confidence												.	.												.	.
Template Conservation																									.	.
Template Sequence		R	D	A	G	K	V	V	D	S	E	T	A	S	I	C	D	A	I	F	Q	D	E	E	.	.	T	E	G	A	V	R	R	F	I	A	E	M	R	Q	R	V	Q	A	D	R	N	V	V	N	Y	P	S	I	L	H	P	I	D	Y	A	F	N
Template Known Secondary structure		S	S					S												T	T	S			.	.	S										T							G	G	G	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions