Job Description A5PFJ8 Confidence 5.63% Date Thu Jan 5 10:55:34 GMT 2012 Rank 98 Aligned Residues 45 % Identity 16% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	H	F	C	E	N	P	G	K	I	Q	S	R	A	E	L	L	K	K	M	T	G	R	E	L	K	P	H	D	R	T	V	D	V	T	I	R	R	I	R	K	H	F	E	S	T	P	D	T	P	E	I	I	A	T	I	H	G	E	G	Y
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Sequence		F	K	R	F	N	T	D	G	I	E	K	A	S	S	K	Q	I	A	D	A	L	G	I	D	S	A	.	.	.	.	.	.	.	.	.	.	.	.	T	V	R	R	D	F	S	Y	F	G	E	L	G	.	.	.	.	.	R	R	G	F	G	Y
Template Known Secondary structure								T	T														T	S				.	.	.	.	.	.	.	.	.	.	.	.								T	T				S	.	.	.	.	.	B	T	T	T	B
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.													.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions