Job Description A5PFJ8 Confidence 7.25% Date Thu Jan 5 10:55:34 GMT 2012 Rank 85 Aligned Residues 53 % Identity 17% Template c3bwgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk; PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168 Resolution 2.09 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																.										.	.	.	.
Query SS confidence																.										.	.	.	.
Query Sequence		R	A	E	L	L	K	K	M	T	G	R	E	L	K	.	P	H	D	R	T	V	D	V	T	.	.	.	.	I	R	R	I	R	K	H	F	E	S	T	P	D	T	P	E	I	I	A	T	I	H	G	E	G	Y	R	F	C	G	D
Query Conservation																.										.	.	.	.
Alig confidence																.										.	.	.	.																	.
Template Conservation																																														.
Template Sequence		E	T	Y	I	E	E	H	Q	L	Q	Q	G	D	K	L	P	V	L	E	T	L	X	A	Q	F	E	V	S	K	S	T	I	T	K	S	L	E	L	L	E	Q	K	G	A	.	I	F	Q	V	R	G	S	G	I	F	V	R	K	H
Template Known Secondary structure								T	T			T	T		B											T	T																T	T	S	.					T	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions