 |
Job Description | P76407 | Confidence | 20.91% | Date | Thu Jan 5 12:22:50 GMT 2012 |
Rank | 359 | Aligned Residues | 104 |
% Identity | 13% | Template | d2djia2 |
SCOP info | Thiamin diphosphate-binding fold (THDP-binding)
| Thiamin diphosphate-binding fold (THDP-binding)
| Pyruvate oxidase and decarboxylase Pyr module
|
Resolution | 1.60 |
|
 |
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | L | P | L | R | E | A | I | M | L | L | R | E | E | G | M | T | I | H | V | R | V | T | W | E | K | G | D | A | A | R | Y | V | E | E | A | R | K | . |
. |
F | G | V | A | T | V | I | A | G | G | G | D | G | T | I | N | E | V | S | T | A | L | I | Q | C | E | G | D | D | I | P | A | L | G | I | L | P | L | G | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|
|   |   |
| . |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |
Template Sequence |   |
S | G | T | L | S | S | L | M | D | A | M | G | E | E | E | N | N | V | K | F | L | Q | V | K | H | E | E | V | G | A | M | A | A | V | M | Q | S | K | F | G | G | N | L | G | V | T | V | G | S | G | G | P | G | A | S | H | . |
L | I | N | G | L | Y | D | A | A | M | D | N | I | P | V | V | A | I | L | G | S | R | P |
Template Known Secondary structure |   |
| T | T | T |  |  |  |  | T | T | S | S | S | T | T |
|
|
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |
| T | T |  |  |  |  | T | . | T |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | N | D | F | A | T | S | V | G | I | P | E | A | L | D | K | A | L | K | L | A | I | A | G | D | A | I |
Query Conservation |   |
  |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
Q | R | E | L | N | M | D | A | F | Q | E | L | N | Q | N | P | M | Y | D | H | I | A | V | Y | N | R | R |
Template Known Secondary structure |   |
G | G | G | T | T | T | T |
| T | T |
|
|
|
|  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|