Job Description P76407 Confidence 98.70% Date Thu Jan 5 12:22:50 GMT 2012 Rank 11 Aligned Residues 247 % Identity 19% Template c3pfnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:nad kinase; PDBTitle: crystal structure of human nad kinase Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																					.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	F	P	A	S	L	L	I	L	N	G	K	S	T	D	N	L	P	.	L	R	E	A	I	M	L	L	R	E	E	G	M	T	I	H	V	R	V	T	W	E	K	G	D	A	A	R	Y	V	E	E	A	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	V	A	T	V	I	A	G
Query Conservation																					.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	P	K	S	V	L	V	I	K	K	X	R	D	A	S	L	L	Q	P	F	K	E	L	C	T	H	L	X	E	E	N	X	I	V	Y	V	E	K	K	V	L	E	D	P	A	I	A	S	D	E	S	F	G	A	V	K	K	K	F	C	T	F	R	E	D	Y	D	D	I	S	N	Q	I	D	F	I	I	C	L
Template Known Secondary structure		S											T	T		G	G	G														T	S												S					S		S	T	T												T	T	T				T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence		G	G	D	G	T	I	N	E	V	S	T	A	L	I	Q	C	E	G	D	D	I	P	A	L	G	I	L	P	L	G	T	A	N	D	F	A	T	S	V	G	I	P	E	A	L	D	K	A	L	K	L	A	I	A	G	D	A	I	.	.	.	.	.	.	.	A	I	D	M	A	Q	V	N	K	Q	T	C	F	I	N
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence																			.	.	.	.																	.	.																				.	.	.	.	.	.	.
Template Conservation																			.	.	.	.																	.	.
Template Sequence		G	G	D	G	T	L	L	Y	A	S	S	L	F	Q	G	S	V	.	.	.	.	P	P	V	X	A	F	H	L	G	S	L	G	F	L	T	P	.	.	F	S	F	E	N	F	Q	S	Q	V	T	Q	V	I	E	G	N	A	A	V	V	L	R	S	R	L	K	V	R	V	V	K	Q	A	X	Q	Y	Q	V	L	N
Template Known Secondary structure		S	S	T	T										S	S	S		.	.	.	.								S	S	S		T	T	T			.	.			S	T	T											S			B																					S	S
Template Predicted Secondary structure																			.	.	.	.																	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	T	G	G	F	G	T	R	I	T	T	E	T	P	E	K	L	K	A	A	L	G	S	V	S	Y	I	I	H	G	L	M	R	M	D	T	L	Q	P	D	R	C	E	I	R	G	E	N	F	H	W	Q	G	D	A	L	V	I	G	I	G	N	G	R	Q	A	G	G	G	Q	Q	L	C	P	N	A	L	I	N
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	V	I	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	L	S	N	V	D	V	Y	L	D	G	H	L	I	T	T	V	Q	G	D	G	V	I	V	S	T	P	T	G	S	T	A	Y	A	A	A	A	G	A	S	X	I
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T																G	G	G	G	G	T					T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290																																.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.												.	.	.	.
Query SS confidence																																												.	.	.	.												.	.	.	.
Query Sequence		D	G	L	L	Q	L	R	I	F	T	G	D	E	I	L	P	A	L	V	S	T	L	K	S	D	E	D	N	P	N	I	I	E	G	A	S	S	W	F	D	I	Q	.	.	.	.	A	P	H	D	I	T	F	N	L	D	G	.	.	.	.	E	P	L	S	G	Q	N	F	H	I	E	I	L	P	A	A	L	R	C
Query Conservation																																												.	.	.	.												.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																					.	.	.	.												.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		H	P	N	V	P	A	I	X	I	T	P	I	C	.	.	.	.	.	.	.	.	.	P	H	S	L	S	F	R	P	I	V	V	P	A	G	V	E	L	K	I	X	L	S	P	E	A	R	N	T	A	W	V	S	F	D	G	R	K	R	Q	E	I	R	H	G	D	S	I	S	I	T	T	S	C	Y	P	L	P	S
Template Known Secondary structure			T	T	S										.	.	.	.	.	.	.	.	.		S	S	T	T								T	T									T	T		S	S							T	T								T	T									S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.										350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	P	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	V	R	D
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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