Job Description P76407 Confidence 21.65% Date Thu Jan 5 12:22:50 GMT 2012 Rank 350 Aligned Residues 83 % Identity 19% Template c3ksmA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc-type sugar transport system, periplasmic component; PDBTitle: crystal structure of abc-type sugar transport system, periplasmic2 component from hahella chejuensis Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.
Predicted Secondary structure															.	.																																							.	.	.	.																.
Query SS confidence															.	.																																							.	.	.	.																.
Query Sequence		P	A	S	L	L	I	L	N	G	K	S	T	D	.	.	N	L	P	L	R	E	A	I	M	L	L	R	E	E	G	M	T	I	H	V	R	V	T	W	E	K	G	D	A	A	R	Y	V	E	E	A	R	K	.	.	.	.	F	G	V	A	T	V	I	A	G	G	G	D	G	T	I	.	N	E	V	S	T	A	L
Query Conservation															.	.																																							.	.	.	.																.
Alig confidence															.	.																																							.	.	.	.																.
Template Conservation
Template Sequence		P	K	L	L	L	V	L	K	G	D	S	N	A	Y	W	R	Q	V	Y	L	G	A	Q	K	A	A	D	E	A	G	V	T	L	L	H	R	S	T	K	D	D	G	D	I	A	G	Q	I	Q	I	L	S	Y	H	L	S	Q	A	P	P	D	A	L	I	L	A	P	N	S	A	E	D	L	T	P	S	V	A	Q	Y
Template Known Secondary structure									S		S	S	S	T																	T									S	S	T	T																S			S							S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	C	E	G	D	D	I	P	A	L	G	I	L
Query Conservation
Alig confidence						.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		R	A	R	N	.	.	.	.	I	P	V	L	V	V
Template Known Secondary structure				T	T	.	.	.	.
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		119	120	.	.					.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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