Job Description P76407 Confidence 54.51% Date Thu Jan 5 12:22:50 GMT 2012 Rank 192 Aligned Residues 97 % Identity 7% Template c3h6hB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:glutamate receptor, ionotropic kainate 2; PDBTitle: crystal structure of the glur6 amino terminal domain dimer assembly2 mpd form Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	F	P	A	S	L	L	I	L	N	G	K	S	T	D	N	L	P	L	R	E	A	I	M	L	L	R	E	E	G	M	T	I	H	V	R	V	T	W	E	K	G	D	A	A	R	Y	V	E	E	A	R	K	F	G	V	A	T	V	I	A	G	G	G	D	G	T	I	N	E	V	S	T	A	L	I	Q	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	W	K	T	V	T	V	V	Y	D	D	S	T	G	L	I	R	L	Q	E	L	I	K	A	P	S	R	Y	N	L	R	L	K	I	R	Q	L	P	A	D	T	K	D	A	K	P	L	L	K	E	M	K	R	G	K	E	F	H	V	I	F	D	C	S	H	E	M	A	A	G	I	L	K	Q	A	L	A	M	G
Template Known Secondary structure		T	T		S							S	S	T						S					T	G	G	G	T	S	S										S	S	G	G	G											T	T								S																T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	D	I	P	A	L	G	I	L	P	L	G	T	A	N	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	M	T	E	Y	Y	H	Y	I	F	T	T	L	D	L	F	A
Template Known Secondary structure				S	T	T								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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