Return to main results Retrieve Phyre Job Id

Job DescriptionP76407
Confidence33.42%DateThu Jan 5 12:22:50 GMT 2012
Rank271Aligned Residues86
% Identity8%Templatec2rjoA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of twin-arginine translocation pathway signal2 protein from burkholderia phytofirmans
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10....... ..20.........30.........40.. .......50.........60.........70.........80
Predicted Secondary structure 






...







.











Query SS confidence 












. . .
























.





































Query Sequence  PASLLILNGKSTD. . . NLPLREAIMLLREEGMTIHVRVTWE. KGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQC
Query Conservation   
  

 

 

 ...          
   
    
  
  .   
            
 


 





  
   
   
Alig confidence 












...
























.





































Template Conservation    



        
      
    
   
          
   
   
   
    
 


                
Template Sequence  QTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPNDSADARVIVEAC
Template Known Secondary structure 

S
TTST


TT
TTT


SS
Template Predicted Secondary structure 
























Template SS confidence 















































































   40.........50.........60.........70.........80.........90.........100.........110.........
 
   81........90
Predicted Secondary structure 





Query SS confidence 









Query Sequence  EGDDIPALGI
Query Conservation       
 


Alig confidence 









Template Conservation     

 

  
Template Sequence  SKAGAYVTTI
Template Known Secondary structure  T
Template Predicted Secondary structure 


Template SS confidence 









   120.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions