Job Description P76407 Confidence 91.18% Date Thu Jan 5 12:22:50 GMT 2012 Rank 65 Aligned Residues 68 % Identity 15% Template c2funB_ PDB info PDB header:apoptosis/hydrolase Chain: B: PDB Molecule:caspase-8; PDBTitle: alternative p35-caspase-8 complex Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.			.	.	.	10	.	.																		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.
Predicted Secondary structure								.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query SS confidence								.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query Sequence		M	A	E	F	P	A	.	.	S	L	L	I	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	S	T	D	N	L	P	L	R	E	A	I	M	L	L	R	E	E	G	M	T	I	H	V	R	V	T	W	E	K	G	D	A	A	R	Y	V	E	E	A	R	K	F	.	.	.	.	G
Query Conservation								.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Alig confidence								.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template Conservation
Template Sequence		M	K	S	K	P	R	G	Y	C	L	I	I	N	N	H	N	F	A	K	A	R	E	K	V	P	K	L	H	S	I	R	D	R	N	G	T	H	L	D	A	G	A	L	T	T	T	F	E	E	L	H	F	E	I	K	P	H	H	D	C	T	V	E	Q	I	Y	E	I	L	K	I	Y	Q	L	M	D	H	S	N	M
Template Known Secondary structure					S	S																		S	S	G	G	G	G	S					T	T															T	T						B		S																S			T	T
Template Predicted Secondary structure
Template SS confidence
		2228	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.
		58	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	V	I	A	G	G	G	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	C	F	I	C	C	I	L	S	H	G
Template Known Secondary structure		S								S
Template Predicted Secondary structure
Template SS confidence
		2308	.	2310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions