Job Description P76407 Confidence 98.66% Date Thu Jan 5 12:22:50 GMT 2012 Rank 12 Aligned Residues 228 % Identity 13% Template c1z0zC_ PDB info PDB header:transferase Chain: C: PDB Molecule:probable inorganic polyphosphate/atp-nad kinase; PDBTitle: crystal structure of a nad kinase from archaeoglobus2 fulgidus in complex with nad Resolution 2.85 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	L	I	L	N	G	K	S	T	D	N	L	P	L	R	E	A	I	M	L	L	R	E	E	G	M	T	I	H	V	R	V	T	W	E	K	G	D	A	A	R	Y	V	E	E	A	R	K	F	G	V	A	T	V	I	A	G	G	G	D	G	T	I	N	E	V	S	T	A	L	I	Q	C	E	G	D	D	I
Query Conservation
Alig confidence												.	.	.	.																											.	.	.	.	.	.	.	.	.	.																.	.	.											.	.
Template Conservation												.	.	.	.																											.	.	.	.	.	.	.	.	.	.																.	.	.											.	.
Template Sequence		R	A	A	V	V	Y	K	T	D	G	.	.	.	.	H	V	K	R	I	E	E	A	L	K	R	L	E	V	E	V	E	L	F	N	Q	P	S	E	E	L	.	.	.	.	.	.	.	.	.	.	E	N	F	D	F	I	V	S	V	G	G	D	G	T	I	.	.	.	L	R	I	L	Q	K	L	K	R	C	.	.
Template Known Secondary structure								S	S	S	S	.	.	.	.	T										T	T	T							S	S			G	G	G	.	.	.	.	.	.	.	.	.	.	G	G	S	S						S	S					.	.	.					T	T		S	S		.	.
Template Predicted Secondary structure												.	.	.	.																											.	.	.	.	.	.	.	.	.	.																.	.	.											.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																			.														.	.											.	.
Query SS confidence																																			.														.	.											.	.
Query Sequence		P	A	L	G	I	L	P	L	G	T	A	N	D	F	A	T	S	V	G	I	P	E	A	L	D	K	A	L	K	L	A	I	A	.	G	D	A	I	A	I	D	M	A	Q	V	N	K	.	.	Q	T	C	F	I	N	M	A	T	G	.	.	G	F	G	T	R	I	T	T	E	T	P	E	K	L	K	A	A	L	G
Query Conservation																																			.														.	.											.	.
Alig confidence																		.	.																.														.	.											.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	I	F	G	I	N	T	G	R	V	G	L	L	T	H	.	.	A	S	P	E	N	F	E	V	E	L	K	K	A	V	E	K	F	E	V	E	R	F	P	R	V	S	C	S	A	M	P	D	V	L	A	L	N	E	I	A	V	L	S	R	K	P	A	K	M	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S			S	S			.	.	B		T	T	T												T											S	S	S	T	T				S	S							S	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	S	Y	I	I	H	G	L	M	R	M	D	T	L	Q	P	D	R	C	E	I	R	G	E	N	F	H	W	Q	G	D	A	L	V	I	G	I	G	N	G	R	Q	A	G	G	G	Q	Q	L	C	P	N	A	L	I	N	D	G	L	L	Q	L	R	I	F	T	G	D	E	I	L	P	A	L	V	S	T	L	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	V	A	L	R	V	D	G	V	E	V	D	R	I	R	C	D	G	F	I	V	A	T	Q	I	G	S	T	G	Y	A	F	S	A	G	G	P	V	V	E	P	Y	L	E	C	F	I	L	I	P	I	A	P	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T									S							S	G	G	G	G	T					T	T						T	T	S								S	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
																			128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		S	D	E	D	N	P	N	I	I	E	G	A	S	S	W	F	D	I	Q	A	P	H	D	I	T	F	N	L	D	G	E	P	L	S	.	.	G	Q	N	F	H	I	E	I	L	P	A	A	L	R	C	R	L	P	P	D
Query Conservation																																				.	.
Alig confidence																						.														.	.
Template Conservation																						.
Template Sequence		F	R	F	G	W	K	P	Y	V	V	S	M	E	R	K	I	E	V	I	A	.	E	K	A	I	V	V	A	D	G	Q	K	S	V	D	F	D	G	E	I	T	I	E	K	S	E	F	P	A	V	F	F	K	N	E	K
Template Known Secondary structure			S	S	S								T	T	S							.								T	T	T															S									T	T
Template Predicted Secondary structure																						.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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