Job Description P76407 Confidence 99.49% Date Thu Jan 5 12:22:50 GMT 2012 Rank 9 Aligned Residues 228 % Identity 15% Template c1yt5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:inorganic polyphosphate/atp-nad kinase; PDBTitle: crystal structure of nad kinase from thermotoga maritima Resolution 2.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	L	I	L	N	G	K	S	T	D	N	L	P	L	R	E	A	I	M	L	L	R	E	E	G	M	T	I	H	V	R	V	T	W	E	K	G	D	A	A	R	Y	V	E	E	A	R	K	F	G	V	A	T	V	I	A	G	G	G	D	G	T	I	N	E	V	S	T	A	L	I	Q	C	E	G	D	D	I
Query Conservation
Alig confidence												.	.																													.	.	.	.	.	.	.	.	.	.																					.						.	.	.	.
Template Conservation												.	.																													.	.	.	.	.	.	.	.	.	.																					.						.	.	.	.
Template Sequence		K	I	A	I	L	Y	R	E	E	R	.	.	E	K	E	G	E	F	L	K	E	K	I	S	K	E	H	E	V	I	E	F	G	E	A	N	A	P	G	R	.	.	.	.	.	.	.	.	.	.	V	T	A	D	L	I	V	V	V	G	G	D	G	T	V	L	K	A	A	K	.	K	A	A	D	G	.	.	.	.
Template Known Secondary structure									G	G	G	.	.												T	T	T	S								S	S	S		S		.	.	.	.	.	.	.	.	.	.	B			S																T	.	T	B		T	T	.	.	.	.
Template Predicted Secondary structure												.	.																													.	.	.	.	.	.	.	.	.	.																					.						.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.											.	.
Query SS confidence																																																.	.	.	.	.											.	.
Query Sequence		P	A	L	G	I	L	P	L	G	T	A	N	D	F	A	T	S	V	G	I	P	E	A	L	D	K	A	L	K	L	A	I	A	G	D	A	I	A	I	D	M	A	Q	V	N	K	.	.	.	.	.	Q	T	C	F	I	N	M	A	T	G	.	.	G	F	G	T	R	I	T	T	E	T	P	E	K	L	K	A	A
Query Conservation																																																.	.	.	.	.											.	.
Alig confidence																				.	.																											.	.	.	.	.											.	.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	M	V	G	F	K	A	G	R	L	G	F	L	T	S	Y	T	.	.	L	D	E	I	D	R	F	L	E	D	L	R	N	W	N	F	R	E	E	T	R	W	F	I	Q	I	E	S	E	L	G	N	H	L	A	L	N	D	V	T	L	E	R	D	L	S	G	K	M	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S	S			S	S			B		.	.	G	G	G										T	T															T	T						S	S								T	T	S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		L	G	S	V	S	Y	I	I	H	G	L	M	R	M	D	T	L	Q	P	D	R	C	E	I	R	G	E	N	.	.	.	F	H	W	Q	G	D	A	L	V	I	G	I	G	N	G	R	Q	A	G	G	G	Q	Q	L	C	P	N	A	L	I	N	D	G	L	L	Q	L	R	I	F	T	G	D	E	I	L	P	A	L
Query Conservation																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.																																														.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	I	E	V	E	V	E	H	H	S	S	M	W	F	F	A	D	G	V	V	I	S	T	P	T	G	S	T	A	Y	S	L	S	I	G	G	P	I	I	F	P	E	C	E	V	L	E	I	S	P	I	A	P	Q	F	F	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S								S							T	G	G	G	G	T	T	T	T	T	T	T						T	T										S		S	T	T	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Template SS confidence
																					132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		V	S	T	L	K	S	D	E	D	N	P	N	I	I	E	G	A	S	S	W	F	D	I	Q	A	P	H	D	I	T	F	N	L	D	G	E	P	L	S	.	G	Q	N	F	H	I	E	I	L	P	A	A	L	R	C	R	L	P	P	D
Query Conservation																																									.
Alig confidence		.	.	.	.	.	.	.	.																																.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	T	R	S	V	V	I	P	S	N	F	K	V	V	V	E	S	Q	R	D	I	N	M	L	V	D	G	V	L	T	G	K	T	K	R	I	E	V	K	K	S	R	R	Y	V	R	I	L	R	P	P	E
Template Known Secondary structure		.	.	.	.	.	.	.	.									T	T	S															T	T																								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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