Job Description P76407 Confidence 88.86% Date Thu Jan 5 12:22:50 GMT 2012 Rank 81 Aligned Residues 68 % Identity 13% Template c1nmqB_ PDB info PDB header:apoptosis, hydrolase Chain: B: PDB Molecule:caspase-3; PDBTitle: extendend tethering: in situ assembly of inhibitors Resolution 2.40 Å

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.			.	.	.	10	.	.											.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.
Predicted Secondary structure								.	.							.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query SS confidence								.	.							.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query Sequence		M	A	E	F	P	A	.	.	S	L	L	I	L	N	.	.	.	.	.	.	.	.	.	.	G	K	S	T	D	N	L	P	L	R	E	A	I	M	L	L	R	E	E	G	M	T	I	H	V	R	V	T	W	E	K	G	D	A	A	R	Y	V	E	E	A	R	K	F	G	V	.	.	.	.	A	T	V	I	A	G
Query Conservation								.	.							.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Alig confidence								.	.							.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Template Conservation
Template Sequence		M	D	Y	P	E	M	G	L	C	I	I	I	N	N	K	N	F	H	K	S	T	G	M	T	S	R	S	G	T	D	V	D	A	A	N	L	R	E	T	F	R	N	L	K	Y	E	V	R	N	K	N	D	L	T	R	E	E	I	V	E	L	M	R	D	V	S	K	E	D	H	S	K	R	S	S	F	V	C	V	L
Template Known Secondary structure				S	S															G	G	G						T	T															T	T								S															T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		65	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	H	G
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions