Job Description P39344 Confidence 0.93% Date Thu Jan 5 11:59:34 GMT 2012 Rank 48 Aligned Residues 84 % Identity 7% Template c3rkoN_ PDB info PDB header:oxidoreductase Chain: N: PDB Molecule:nadh-quinone oxidoreductase subunit n; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	L	L	Y	V	G	V	P	M	V	A	A	L	S	V	T	H	C	F	L	P	P	H	P	G	P	T	A	I	A	T	I	F	E	A	N	L	G	T	T	L	L	Y	G	F	I	I	T	I	P	T	V	I	V	A	G	P	L	F	S	K	L	L	T	R	F	E	K	A	P	P	E	G	L	F	N	P	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	W	H	R	P	I	L	A	A	V	M	T	V	M	M	L	S	L	A	G	I	P	M	T	L	G	F	I	G	K	F	Y	V	L	A	V	G	V	Q	A	H	L	W	W	L	V	G	A	V	V	V	G	S	A	I	G	L	Y	Y	Y	L	R	V	A	V	S	L	Y	L	H	A	P	E	Q	P	S	N	W	Q	Y
Template Known Secondary structure		T	T	T	S														T	T	T		T	T	S																T	T																												S								S	T	T
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		214	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	G	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		451	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions