 |
Job Description | P0AAK7 | Confidence | 4.49% | Date | Thu Jan 5 11:13:11 GMT 2012 |
Rank | 99 | Aligned Residues | 87 |
% Identity | 17% | Template | c3p11A_ |
PDB info |
PDB header:immune system | Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; |
PDBTitle: anti-egfr/her3 fab dl11 in complex with domains i-iii of the her32 extracellular region
|
Resolution | 3.70 Å |
|
 |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | K | S | C | Q | H | C | D | H | A | P | C | V | D | V | C | P | T | G | A | S | F | R | D | A | A | . |
. |
. |
. |
. |
. |
. |
. |
S | G | I | V | D | V | N | P | D | L | C | V | G | C | . |
. |
. |
. |
. |
. |
Q | Y | C | I | A | A | C | P | Y | R | V | R | F | I | H | P | V | T | K | T | A | D | K | C | D | F |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |
|   |
|   |
|
|   |   |   |
|
|
|
| . | . | . | . | . | . |
|   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
S | E | D | C | Q | T | L | T | K | T | I | C | A | P | Q | C | N | G | H | C | F | G | P | N | P | N | Q | C | C | H | D | E | C | A | G | G | C | S | G | P | Q | D | T | D | C | F | A | C | R | H | F | N | D | S | G | A | C | V | P | R | C | P | Q | P | L | V | Y | N | K | L | T | F | Q | L | E | P | N | P | H | T |
Template Known Secondary structure |   |
S | S |
| B |
|
|
|
|
|
|
|
|
| T | T | T | T | S |
| B | S | S | S | S | S | S |
| B |
|
| T | T | B | S | S |
| B | S | S | S | S | S | T | T | B | S | S | B | S | S |  |  |  | T | T |  |  |  | S | S |
|
|
| S |  |  |  |
| S | S | S | S | S |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
  |
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | R | K | T | N | L | Q | A | G | K | L | P | A | C | V | E | A | C | P | T | K | A | L | T | F | G | N |
Query Conservation |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |
|
|   |
Alig confidence |   |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | Y | . |
. |
. |
. |
. |
. |
Q | Y | G | G | V | C | V | A | S | C | P | H | N | F | V | V | D | Q | T |
Template Known Secondary structure |   |
|  | . | . | . | . | . | . |  | S | S | S | B |  |  | S | S |
|
| S | S |
|  |  |  | T | T |
Template Predicted Secondary structure |   |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
260 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|