 |
Job Description | P0AAK7 | Confidence | 4.70% | Date | Thu Jan 5 11:13:11 GMT 2012 |
Rank | 97 | Aligned Residues | 30 |
% Identity | 33% | Template | c1m1jA_ |
PDB info |
PDB header:blood clotting | Chain: A: PDB Molecule:fibrinogen alpha subunit; |
PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
|
Resolution | 2.70 Å |
|
  |   |
166 | . | . | . | 170 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | C | V | E | A | . |
. |
. |
. |
. |
C | P | T | K | A | L | T | F | G | N | L | D | D | P | N | S | E | I | S | Q | L | L | R | Q |
Query Conservation |   |
|
|
|
|   |   | . | . | . | . | . |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |
|
|   |
|
Template Sequence |   |
P | I | C | V | D | D | D | W | G | T | K | C | P | S | G | C | R | M | Q | G | I | I | D | D | T | D | Q | N | Y | S | Q | R | I | D | N |
Template Known Secondary structure |   |
|
|
|
| T | T | S | T | T | T | S |
|
|
| S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|