Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7P5
Confidence99.94%DateThu Jan 5 11:06:01 GMT 2012
Rank12Aligned Residues46
% Identity100%Templatec2z4l2_
PDB info PDB header:ribosomeChain: 2: PDB Molecule:50s ribosomal protein l34; PDBTitle: crystal structure of the bacterial ribosome from escherichia2 coli in complex with paromomycin and ribosome recycling3 factor (rrf). this file contains the 50s subunit of the4 first 70s ribosome, with paromomycin and rrf bound. the5 entire crystal structure contains two 70s ribosomes and is6 described in remark 400.
Resolution4.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40......
Predicted Secondary structure 














Query SS confidence 













































Query Sequence  MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
Query Conservation 







  



 



 

 
  

 

 


 


  



 
Alig confidence 













































Template Conservation 







  



 



 

 
  

 

 


 


  



 
Template Sequence  MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
Template Known Secondary structure 


S




TTST
SSSS


Template Predicted Secondary structure 














Template SS confidence 













































   1........10.........20.........30.........40......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions