 |
| Job Description | P0A7P5 | | Confidence | 99.94% | Date | Thu Jan 5 11:06:01 GMT 2012 |
| Rank | 30 | Aligned Residues | 46 |
| % Identity | 100% | Template | c2vhn2_ |
| PDB info |
PDB header:ribosome | Chain: 2: PDB Molecule:50s ribosomal protein l34; | PDB Fragment:residues 2-142
PDBTitle: structure of pdf binding helix in complex with the ribosome.2 (part 2 of 4)
|
| Resolution | 3.74 Å |
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | K | R | T | F | Q | P | S | V | L | K | R | N | R | S | H | G | F | R | A | R | M | A | T | K | N | G | R | Q | V | L | A | R | R | R | A | K | G | R | A | R | L | T | V | S | K |
| Query Conservation |   |
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|
|
|   |
|
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|
|
|   |
|
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|
|
|
|   |
| Template Sequence |   |
M | K | R | T | F | Q | P | S | V | L | K | R | N | R | S | H | G | F | R | A | R | M | A | T | K | N | G | R | Q | V | L | A | R | R | R | A | K | G | R | A | R | L | T | V | S | K |
| Template Known Secondary structure |   |
|
|
| S |
|
|
|
|  |  |  |  | T | T | T | T |
| T | T | T | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| S |
| S |
|
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|