Job Description P0ADU7 Confidence 2.89% Date Thu Jan 5 11:21:53 GMT 2012 Rank 67 Aligned Residues 23 % Identity 22% Template c1bajA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:gag polyprotein; PDBTitle: hiv-1 capsid protein c-terminal fragment plus gag p2 domain Resolution 2.60 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		Y	P	N	K	K	L	H	Q	R	D	E	K	H	Q	I	N	Q	F	.	.	.	.	.	L	A	D	W	L	R	Y	C
Query Conservation																				.	.	.	.	.
Alig confidence							.	.	.											.	.	.	.	.
Template Conservation							.	.	.
Template Sequence		V	Q	N	A	N	.	.	.	P	D	C	K	T	I	L	K	A	L	G	P	G	A	T	L	E	E	M	M	T	A	C
Template Known Secondary structure				T	S		.	.	.												S	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		191	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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