|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | A | S | S | L | R | A | L | K | L | M | D | L | T | T | L | N | D | D | D | T | D | E | K | V | I | A | L | C | H | Q | A | K | T | P | V | G | N | T | A | A | I | C | I | Y | P | R | F | I | P | I | A | R | K | T | L | K | E | Q | . |
G | T | P | E | I | R | I | A | T | V | T | N | F | P | H | G | N | D | D | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   | . |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |
|
|   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |
Template Sequence |   |
K | F | A | A | W | S | V | I | C | L | T | D | H | T | F | L | D | E | N | G | T | E | D | D | I | R | E | L | C | N | E | S | V | K | T | C | P | F | A | A | A | V | C | V | Y | P | K | F | V | K | F | I | N | E | K | I | K | Q | E | I | N | P | F | K | P | K | I | A | C | V | I | N | F | P | Y | G | T | D | S | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |  |  |  |  |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |
|
| S |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
| S |  |  |  |  |  |  | S | T | T | T |
|
| S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | A | L | A | E | T | R | A | A | I | A | Y | G | A | D | E | V | D | V | V | F | P | Y | R | A | L | M | A | G | N | E | Q | V | G | F | D | L | V | K | A | C | K | E | A | C | A | A | A | . |
N | V | L | L | K | V | I | I | E | T | G | E | L | K | D | E | A | L | I | R | K | A | S | E | I | S | I | K | A | G |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   | . |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|
Template Sequence |   |
E | K | V | L | N | D | T | E | K | A | L | D | D | G | A | D | E | I | D | L | V | I | N | Y | K | K | I | I | E | N | T | D | E | G | L | K | E | A | T | K | L | T | Q | S | V | K | K | L | L | T | N | K | I | L | K | V | I | I | E | V | G | E | L | K | T | E | D | L | I | I | K | T | T | L | A | V | L | N | G | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
|  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |
|
|  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | F | I | K | T | S | T | G | K | V | A | V | N | A | T | P | E | S | A | R | I | M | M | E | V | I | R | D | M | . |
. |
. |
. |
. |
G | V | E | K | T | V | G | F | K | P | A | G | G | V | R | T | A | E | D | A | Q | K | Y | L | A | I | A | D | E | L | F | G | A | D | W | A | D | A | R | H | Y | R | F | G | A |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   | . | . | . | . | . |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |
|   |   | . | . | . | . | . | . |   |   |   |
|
|
|   |
|
|
|
|
Template Sequence |   |
A | D | F | I | K | T | S | T | G | K | V | Q | I | N | A | T | P | S | S | V | E | Y | I | I | K | A | I | K | E | Y | I | K | N | N | P | E | K | N | N | K | I | G | L | K | V | S | G | G | I | S | D | L | N | T | A | S | H | Y | I | L | L | A | R | . |
. |
. |
. |
. |
. |
R | F | L | S | D | N | F | R | I | G | S |
Template Known Secondary structure |   |
| S |  |  |  |
|
|
| S |
| S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | T | T |
|
|  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  | T |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
230 | . | . | . | . | . | . | . | . | . | 240 |
  |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | S | L | L | A | S | L | L | K | A | L |
Query Conservation |   |
|
|   |   |   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|
|   |
|   |   |
Template Sequence |   |
S | S | L | V | I | K | L | R | K | V | I |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
247 | . | . | 250 | . | . | . | . | . | . | . |
  |