 |
Job Description | P0A6L0 | Confidence | 36.71% | Date | Thu Jan 5 11:03:24 GMT 2012 |
Rank | 265 | Aligned Residues | 101 |
% Identity | 21% | Template | d1wo8a1 |
SCOP info | Methylglyoxal synthase-like
| Methylglyoxal synthase-like
| Methylglyoxal synthase, MgsA
|
Resolution | 1.70 |
|
 |
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | N | D | D | D | T | D | E | K | V | I | A | L | C | H | Q | A | K | T | P | V | G | N | T | A | A | I | C | I | Y | P | R | F | I | P | I | A | R | K | T | L | K | E | Q | G | T | P | E | I | R | I | A | T | V | T | N | F | P | H | G | N | D | D | I | D | I | A | L | A | E | T | R | A | A | I | A | Y | G | A |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|   | . |   |
|   |
|
|   |
|
|   |   |   |
|   |
|   |   |
| . | . | . | . | . | . |
|   |
|   |   |
|   |   |   |   |   |
|
|
| . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |
| . |
Template Sequence |   |
L | I | A | H | D | A | K | K | D | E | M | V | A | F | C | L | R | H | K | D | V | L | A | R | Y | . |
P | L | L | A | T | G | T | T | G | A | R | I | Q | E | A | T | G | . |
. |
. |
. |
. |
. |
L | A | V | E | R | V | L | S | G | P | L | G | G | D | . |
. |
. |
. |
. |
. |
L | Q | I | G | A | R | V | A | E | G | . |
Template Known Secondary structure |   |
 |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  | T | T | S | . |
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |
|
|
| T | T | T | T |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T | . |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | |
  |
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | E | V | D | V | V | F | P | Y | R | A | L | M | A | G | N | E | Q | V | G | F | D | L | V | K | A | C | K | E | A | C | A | A | A | N | V | L | L |
Query Conservation |   |
  |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   | . | . |
|   |   |   |
|   |
|   |
|   |   |   |   |
|
|   |
Template Sequence |   |
. |
K | V | L | A | V | V | F | L | Q | D | P | L | T | A | K | P | H | E | P | . |
. |
D | V | Q | A | L | M | R | V | C | N | V | H | G | V | P | L |
Template Known Secondary structure |   |
. |
|  |  |  |  |  |  |  |
|
| T | T | S |
|
| T | T |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |
Template Predicted Secondary structure |   |
. |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|