Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6L0
Confidence98.21%DateThu Jan 5 11:03:24 GMT 2012
Rank16Aligned Residues155
% Identity20%Templated1d3ga_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.........100.........110.........120.........130 .........
Predicted Secondary structure 



















......


Query SS confidence 
































































. . . . . .








Query Sequence  PEIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACA. . . . . . AANVLLKVI
Query Conservation    
 
 





 
   
  
  
   

  

 


 


   
  
    
  

  
     ......     



Alig confidence 
































































......







.
Template Conservation     

 


           
           

 



 


                    
  
      

 


.
Template Sequence  DGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLGKAELRRLLTKVLQERDGLRRVHRPAVLVKI.
Template Known Secondary structure  TT




TT
S
GGG
SS

TTSTT

TS
GGG

.
Template Predicted Secondary structure 




































.
Template SS confidence 















































































   174.....180.........190.........200.........210.........220.........230.........240.........250..
 
   140.........150.........160.........170........ .180.........190........
Predicted Secondary structure 


















.....................





Query SS confidence 






































. . . . . . . . . . . . . . . . . . . . .



















Query Sequence  IETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNAT. . . . . . . . . . . . . . . . . . . . . PESARIMMEVIRDMGVEKTV
Query Conservation 


  
   
 
  
   
  











   


..................... 
 
 

   
     
  
Alig confidence  ..







.



























.....................










.....



Template Conservation  .. 
      .    
      
 


   

                

 

       
  
  
    .....   
Template Sequence  . . APDLTSQD. KEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALT. . . . . QGRV
Template Known Secondary structure  ..
S


.T




BS


TT


TTTTSSSGGGT.....TT
S
Template Predicted Secondary structure  ..




.



























.....



Template SS confidence 















































































   257..260.... .....270.........280.........290.........300.........310.........320.... ....
 
   199200.........210.........220.........230.........240.
Predicted Secondary structure 












Query SS confidence 










































Query Sequence  GFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSLL
Query Conservation 









   
   
 
    

   
 


 





  
Alig confidence 



















............










Template Conservation 


  


    

   
  ............


 
 
 
  
Template Sequence  PIIGVGGVSSGQDALEKIRA. . . . . . . . . . . . GASLVQLYTAL
Template Known Secondary structure 
SS

S............T
SS
Template Predicted Secondary structure 





............



Template SS confidence 










































   329330.........340........ .350.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions