Job Description P0A6L0 Confidence 93.99% Date Thu Jan 5 11:03:24 GMT 2012 Rank 132 Aligned Residues 124 % Identity 16% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.														.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.														.	.
Query Sequence		L	A	E	T	R	A	A	I	A	Y	G	A	D	E	V	D	V	V	F	P	Y	R	A	L	M	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	Q	V	G	F	D	L	V	K	A	C	K	E	A	C	A	.	A	A	N	V	L	L	K	V	I	I	E	T	G	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.														.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.														.	.
Template Conservation
Template Sequence		R	D	A	T	L	R	A	I	K	A	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F	S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	E	V	X	R	A	V	Q	E	V	I	D	K	E	A	P	D	N	F	I	L	G	F	R	A	T	P	E
Template Known Secondary structure											T	T		S								T	T	S								T	T	T					S	T	T	S	T	T																										T	T									S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
									144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.													.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	E	L	K	D	E	A	L	I	R	K	A	S	E	I	S	I	K	A	G	A	D	F	I	K	T	S	T	G	.	.	.	.	.	.	.	.	.	.	.	.	K	V	A	V	N	A	T	P	E	S	A	R	I	M	M	E	V	I	R	D	M	G	V	E	K	T	V	G	F	K	P	A	G
Query Conservation		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.
Template Sequence		E	T	R	G	S	D	L	G	Y	T	I	D	E	F	N	Q	L	I	D	W	V	X	D	V	S	N	I	Q	Y	L	A	I	A	S	W	G	R	H	I	Y	Q	N	T	S	R	T	P	G	D	H	F	G	R	P	V	N	Q	I	V	Y	E	H	L	A	G	.	.	.	.	.	.	.	R	I	P	L	I	A	S	G
Template Known Secondary structure					T	T																				S										T	T			G	G	G		B				S	S	T	T	T	T	S	B										T	T	.	.	.	.	.	.	.	S	S						S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.								.	.	300	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	R	T	A	E	D	A	Q	K	Y	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	N	S	P	E	S	A	L	D	A	L	Q
Template Known Secondary structure		S			S								G	G
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions