Job Description P0A6L0 Confidence 47.66% Date Thu Jan 5 11:03:24 GMT 2012 Rank 243 Aligned Residues 90 % Identity 16% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	C	K	E	A	C	A	A	A	N	V	L	L	K	V	I	I	E	T	G	E	L	K	D	E	A	L	I	R	K	A	S	E	I	S	I	K	A	G	A	D	F	I	K	T	S	T	G	K	V	A	V	N	A	T	P	E	S	A	R	I	M	M	E	V	I	R	D	M	G	V	E	K	T	V	G	F	K	P
Query Conservation
Alig confidence													.	.															.																						.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation													.	.															.																						.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		G	N	A	I	M	K	A	K	Q	H	K	.	.	M	L	A	I	Q	R	L	F	M	I	D	S	S	A	.	Y	N	K	G	V	A	L	I	Q	K	V	Q	P	D	C	I	E	L	L	P	G	.	.	.	.	.	I	I	P	E	Q	V	Q	K	M	T	Q	K	L	.	.	.	.	.	.	.	H	I	P	V	I	A
Template Known Secondary structure											T	T	.	.											S				.														S							T	.	.	.	.	.	T													.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.															.																						.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	G	V	R	T	A	E	D	A	Q	K	Y	L	A	I	A	D	E	L	F	G	A	D	W	A	D	A	R	H	Y	R	F	G	A	S	S
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	L	I	E	T	S	E	Q	V	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	V	I	A	S	G	A	I	A	V	T	T	S	N
Template Known Secondary structure			S	S			S							.	.	.	.	.	.	.	.	.	.	.	.			T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.													.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions