Job Description P0A6L0 Confidence 97.05% Date Thu Jan 5 11:03:24 GMT 2012 Rank 82 Aligned Residues 193 % Identity 19% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																.															.	.
Query SS confidence																																.															.	.
Query Sequence		T	L	N	D	D	D	T	D	E	K	V	I	A	L	C	H	Q	A	K	T	P	V	G	N	T	A	A	I	C	I	.	Y	P	R	F	I	P	I	A	R	K	T	L	K	E	.	.	Q	G	T	P	E	I	R	I	A	T	V	T	N	F	P	H	G	N	D	D	I	D	I	A	L	A	E	T	R	A	A	I	A
Query Conservation																																.															.	.
Alig confidence																							.	.								.															.	.																.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		F	A	N	A	F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	.	.	G	V	D	Y	I	E	L	T	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	.	.	.	.	.	.	.	.	.	M	D	D	A	R	V	A	V	E
Template Known Secondary structure		S	T	T																			.	.	T		S							G	G	G													T	S			S	S								S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.										.	.	110	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		Y	G	A	D	E	V	D	V	V	F	P	Y	R	A	L	.	.	.	M	A	G	N	E	Q	V	G	F	D	L	V	K	A	C	K	E	A	C	A	A	A	N	V	L	L	K	V	I	I	E	T	G	E	L	K	D	E	A	L	I	R	K	A	S	E	I	S	I	K	A	G	A	D	F	I	K	T	S	T	G	K
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																																													.	.
Template Conservation																																																																																.	.
Template Sequence		T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A	D	.	.
Template Known Secondary structure		T	T		S								G	G	G																										T	T								T	T	G	G	G	S																		S							.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		V	A	V	N	A	T	P	E	S	A	R	I	M	M	E	V	I	R	D	M	G	V	E	K	T	V	G	F	K	P	.	.	A	G	G	V	R	T	A	E	D	A	Q	K	Y	L	A	I	A	D	E	L	F	G	A	D	W	A	D	A	R	H	Y	R	F	G	A	S
Query Conservation																																.	.
Alig confidence																						.										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	.	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	A	G	A	T	H	I	D	T	S
Template Known Secondary structure		S	S	S																		.		S	S							B		T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.				T							B
Template Predicted Secondary structure																						.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.														240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions