 |
Job Description | P0A6L0 | Confidence | 91.14% | Date | Thu Jan 5 11:03:24 GMT 2012 |
Rank | 145 | Aligned Residues | 119 |
% Identity | 13% | Template | c3inpA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; |
PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
|
Resolution | 2.05 Å |
|
 |
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
T | R | A | A | I | A | Y | G | A | D | E | V | D | V | V | F | P | Y | R | A | L | M | A | G | N | E | Q | V | G | F | D | L | V | K | A | C | K | E | A | C | A | A | A | N | V | L | L | K | V | I | I | E | T | G | E | L | K | D | E | A | L | I | R | K | A | S | E | I | S | I | K | A | G | A | D | F | I | K | . |
. |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|   |   |   |   |   |   |
|
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
I | E | S | F | A | K | A | G | A | T | S | I | V | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | P | E | A | S | E | H | I | D | R | S | L | Q | L | I | K | S | F | G | . |
. |
I | Q | A | G | L | A | L | N | P | A | T | G | I | D | C | L | K | . |
. |
. |
. |
. |
Y | V | E | S | N | I | D | R | V | L | I | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
| S |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
| G | G | G |
| S |
|  |  |  |  |  |  |  |  |  | T | T | T | . | . | S |  |  |  |  |  |  |
| T | T |
|
| S | G | G | G | T | . | . | . | . | . | T | T | G | G | G |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
Predicted Secondary structure |   |
. | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
T | S | T | G | K | V | A | V | N | A | T | P | E | S | A | R | I | M | M | E | V | I | R | D | M | G | V | E | K | T | V | G | F | K | P | A | G | G | V | R | T | A | E | D | A | Q | K | Y | L | A | I | A | D | E | L | F | G | A | D | W | A | D | A | R | H | Y | R | F | G | A | S | S | L | L |
Query Conservation |   |
. | . |
|
|
|
|
|   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|   |   |   |
|
|
| . |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
Template Sequence |   |
S | V | N | P | G | F | Q | K | F | I | P | A | M | L | D | K | A | K | E | I | S | K | W | I | S | S | T | . |
. |
D | R | D | I | L | L | E | I | D | G | G | V | . |
N | P | Y | N | I | A | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | A | V | C | G | V | N | A | F | V | A | G | S | A | I |
Template Known Secondary structure |   |
| S |
| T | T |
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | T | S |
|
|  |  |  |  |  | S | S |
| . |
| T | T | T |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  | T | T | T |
|
|  |  |  |  | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
. | . | . | 170 | . | . | . | . | . | . | . | . | |
. | 180 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|