Job Description P0A6L0 Confidence 90.41% Date Thu Jan 5 11:03:24 GMT 2012 Rank 151 Aligned Residues 191 % Identity 13% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		T	L	N	D	D	D	T	D	E	K	V	I	A	L	C	H	Q	A	K	T	P	V	G	N	T	A	A	I	C	I	.	.	.	.	.	Y	P	R	F	I	P	I	A	R	K	T	L	K	E	Q	G	T	P	E	I	R	I	A	T	V	T	N	F	P	H	G	N	D	D	I	D	I	A	L	A	E	T	R	A	A
Query Conservation																																.	.	.	.	.
Alig confidence																							.	.								.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	E	K	A	N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	.	.	G	I	E	Y	I	E	V	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C	R	.	.	.	.	.	.	.	.	.	.	.	L	D	A	A	K	V	A
Template Known Secondary structure		S	T	T																			.	.	T		S							G	G	G														S			S	S								S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.												.	.	.	80	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		I	A	Y	G	A	D	E	V	D	V	V	F	P	Y	R	A	L	M	A	G	N	E	Q	V	G	F	D	L	V	K	A	C	K	E	A	C	A	A	A	N	V	L	L	K	V	I	I	.	.	E	T	G	E	L	K	D	E	A	L	I	R	K	A	S	E	I	S	I	K	A	G	A	D	F	I	K	T	S	T	G
Query Conservation																																																	.	.
Alig confidence																	.	.																															.	.																	.														.
Template Conservation																	.	.																																																	.														.
Template Sequence		V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	.	.	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	.	A	V	A	P	Y	V	D	R	V	G	L	A	D	.
Template Known Secondary structure				T	T		S								S		.	.																								T	T	S							S	S	T	T	T	S											.			G	G	G		S							.
Template Predicted Secondary structure																	.	.																																																	.														.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		K	V	A	V	N	A	T	P	E	S	A	R	I	M	M	E	V	I	R	D	M	.	G	V	E	K	T	V	G	F	K	P	A	G	G	V	R	T	A	E	D	A	Q	K	Y	L	A	I	A	D	E	L	F	G	A	D	W	A	D	A	R	H	Y	R	F	G	A	S
Query Conservation																							.
Alig confidence		.																					.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	T	V	G	V	A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	A	I	A	N	A	Y	.	.	.	.	.	.	.	.	.	.	.	E	A	I	E	A	G	A	T	H	V	D	T	T
Template Known Secondary structure		.	T	T	S																			T	T	T	S							B		T	T	S								.	.	.	.	.	.	.	.	.	.	.					T	T							B
Template Predicted Secondary structure		.																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.												.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions