Job Description P0A6L0 Confidence 98.29% Date Thu Jan 5 11:03:24 GMT 2012 Rank 15 Aligned Residues 163 % Identity 20% Template c2fptA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, mitochondrial; PDBTitle: dual binding mode of a novel series of dhodh inhibitors Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.												.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	P	I	A	R	K	T	L	K	E	Q	G	T	P	E	I	R	I	A	T	V	T	N	F	P	H	G	N	D	D	I	D	I	A	L	A	E	T	R	A	A	I	A	Y	G	A	D	E	V	D	V	V	F	P	.	.	.	.	.	.	.	.	.	.	.	Y	R	A	L	M	A	G	N	E	Q	V	G	F	D
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																													.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.																													.
Template Sequence		Q	Q	K	Q	A	K	L	T	E	D	G	L	.	.	.	.	P	L	G	V	N	L	G	K	N	K	T	S	V	D	A	A	E	D	Y	A	E	G	V	R	V	L	G	P	.	L	A	D	Y	L	V	V	N	V	S	S	P	N	T	A	G	L	R	S	L	Q	G	K	A	E	L	R	R	L	L	T	K	V	L	Q
Template Known Secondary structure											T	T		.	.	.	.										T	T		S														G	G	.	G		S									T	T	S	T	T	S	G	G	G	G	S
Template Predicted Secondary structure														.	.	.	.																													.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																						.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	K	A	C	K	E	A	C	A	A	A	N	V	L	L	K	V	I	I	E	T	G	E	L	K	D	E	A	L	I	R	K	A	S	E	I	S	I	K	A	G	A	D	F	I	K	T	S	T	G	K	V	A	V	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.									.	.	.									.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.									.	.	.									.
Template Sequence		E	R	D	G	L	R	R	V	H	.	R	P	A	V	L	V	K	I	.	.	.	A	P	D	L	T	S	Q	D	.	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T
Template Known Secondary structure					T	S		G	G	G	.									.	.	.		S							.												T										B	S				T	T				T	T	T	T	S	S	S
Template Predicted Secondary structure											.									.	.	.									.
Template SS confidence
		240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	A	R	I	M	M	E	V	I	R	D	M	G	V	E	K	T	V	G	F	K	P	A	G	G	V	R	T	A	E	D	A	Q	K	Y	L	A	I	A	D	E	L	F	G	A	D	W	A	D	A	R	H	Y	R	F	G	A	S	S	L	L
Query Conservation
Alig confidence												.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	I	R	E	M	Y	A	L	T	.	.	.	.	.	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	Q	D	A	L	E	K	I	R	A	.	.	.	.	.	.	.	.	.	.	.	.	G	A	S	L	V	Q	L	Y	T	A	L
Template Known Secondary structure											T	.	.	.	.	.	T	T		S						S	S			S											.	.	.	.	.	.	.	.	.	.	.	.	T		S					S
Template Predicted Secondary structure												.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.													.	350	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions