Job Description P0A6L0 Confidence 92.93% Date Thu Jan 5 11:03:24 GMT 2012 Rank 138 Aligned Residues 139 % Identity 17% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.																																				.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.																																				.	.	.	.	.	.
Query Sequence		L	A	E	T	R	A	A	I	A	Y	G	A	D	E	V	D	V	V	F	P	Y	R	A	L	.	.	.	.	.	M	A	G	N	E	Q	V	G	F	D	L	V	K	A	C	K	E	A	C	A	A	A	N	V	L	L	K	V	I	I	E	T	G	E	L	.	.	.	.	.	.	K	D	E	A	L	I	R	K	A	S
Query Conservation																										.	.	.	.	.																																				.	.	.	.	.	.
Alig confidence																										.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	G	F	E	A	A	V	A	A	G	A	K	E	V	V	I	F	G	A	A	S	E	L	F	T	K	K	N	I	N	C	S	I	E	E	S	F	Q	R	F	D	A	I	L	K	A	A	Q	S	A	N	I	S	V	R	G	Y	V	S	C	A	L	G	C	P	Y	E	G	K	I	S	P	A	K	V	A	E	V	T
Template Known Secondary structure											T	T		S								S									T	S	S		T	T	T															T	T									S	T	T		B	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	S	I	K	A	G	A	D	F	I	K	T	S	T	G	K	V	A	V	N	A	T	P	E	S	A	R	I	M	M	E	V	I	R	D	M	G	V	E	K	T	V	G	F	K	P	A	G	G	V	R	T	A	E	D	A	Q	K	Y	L	A	I	A	D	E	L	F	G	A	D	W	A	D	A	R	H	Y	R	F
Query Conservation
Alig confidence																						.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	F	Y	S	M	G	C	Y	E	I	S	L	G	D	T	I	G	V	G	.	.	T	P	G	I	M	K	D	M	L	S	A	V	M	Q	E	V	P	L	A	A	L	A	V	H	C	H	D	T	Y	G	Q	A	L	A	N	T	L	.	.	.	.	.	.	.	.	.	.	.	M	A	L	Q	M	G	V	S	V	V
Template Known Secondary structure							T	T		S							T	T				.	.																S		G	G	G						B		T	T	S								.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																						.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.												.	.	.	250	.	.	.	.	.	.
		236	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	S
Template Known Secondary structure				B
Template Predicted Secondary structure
Template SS confidence
		257	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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