Job Description P0A6L0 Confidence 87.76% Date Thu Jan 5 11:03:24 GMT 2012 Rank 159 Aligned Residues 196 % Identity 14% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																.	.	.	.								.	.	.
Query SS confidence																																.	.	.	.								.	.	.
Query Sequence		T	L	N	D	D	D	T	D	E	K	V	I	A	L	C	H	Q	A	K	T	P	V	G	N	T	A	A	I	C	I	.	.	.	.	Y	P	R	F	I	P	I	.	.	.	A	R	K	T	L	K	E	Q	G	T	P	E	I	R	I	A	T	V	T	N	F	P	H	G	N	D	D	I	D	I	A	L	A	E	T	R
Query Conservation																																.	.	.	.								.	.	.
Alig confidence																							.	.								.	.	.	.								.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																																										.	.	.	.	.	.	.	.	.
Template Sequence		N	E	P	V	W	I	A	T	E	D	K	I	T	W	I	N	Q	L	S	R	T	.	.	G	L	S	Y	I	E	I	T	S	F	V	H	P	K	W	I	P	A	L	R	D	A	I	D	V	A	K	G	I	D	R	E	K	G	V	T	Y	A	A	L	V	.	.	.	.	.	.	.	.	.	P	N	Q	R	G	L	E
Template Known Secondary structure		G	S	S	S																T	T	.	.	T		S								S		T	T	T		G	G	G	T	T								S				T	T								.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																							.	.																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.										.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																					.	.	.	.	.																																				.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																																				.	.	.	.	.	.
Query Sequence		A	A	I	A	Y	G	A	D	E	V	D	V	V	F	P	Y	R	A	L	.	.	.	.	.	M	A	G	N	E	Q	V	G	F	D	L	V	K	A	C	K	E	A	C	A	A	A	N	V	L	L	K	V	I	I	E	T	G	E	L	.	.	.	.	.	.	K	D	E	A	L	I	R	K	A	S	E	I	S	I	K
Query Conservation																					.	.	.	.	.																																				.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	L	E	G	G	I	N	E	A	C	V	F	X	S	A	S	E	T	H	N	R	K	N	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	N	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L	S	E	A	L	F	E
Template Known Secondary structure							T		S								S	S						T	T	T		S																			T	T										T	T		B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	D	F	I	K	T	S	T	G	K	V	A	V	N	A	T	P	E	S	A	R	I	M	M	E	V	I	R	D	M	G	V	E	K	T	V	G	F	K	P	A	G	G	V	R	T	A	E	D	A	Q	K	Y	L	A	I	A	D	E	L	F	G	A	D	W	A	D	A	R	H	Y	R	F	G	A	S
Query Conservation
Alig confidence												.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	I	S	E	L	S	L	G	D	.	.	T	I	G	A	A	N	P	A	Q	V	E	T	V	L	E	A	L	L	A	R	F	P	A	N	Q	I	A	L	H	F	H	D	T	R	G	T	A	L	A	N	X	V	.	.	.	.	.	.	.	.	.	.	.	T	A	L	Q	X	G	I	T	V	F	D	G	S
Template Known Secondary structure			T		S							.	.	S	S																	T	T	S		G	G	G						B	G	G	G	S								.	.	.	.	.	.	.	.	.	.	.						T							B
Template Predicted Secondary structure												.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220												.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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