Job Description P0A6L0 Confidence 76.28% Date Thu Jan 5 11:03:24 GMT 2012 Rank 188 Aligned Residues 194 % Identity 14% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																														.	.	.	.									.	.	.
Query SS confidence																														.	.	.	.									.	.	.
Query Sequence		T	L	N	D	D	D	T	D	E	K	V	I	A	L	C	H	Q	A	K	T	P	V	G	N	T	A	A	I	.	.	.	.	C	I	Y	P	R	F	I	P	.	.	.	I	A	R	K	T	L	K	E	Q	G	T	P	E	I	R	I	A	T	V	T	N	F	P	H	G	N	D	D	I	D	I	A	L	A	E	T	R
Query Conservation																														.	.	.	.									.	.	.
Alig confidence																							.	.						.	.	.	.									.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																																												.	.	.	.	.	.	.	.	.
Template Sequence		N	E	K	R	F	V	P	T	A	D	K	I	A	L	I	N	R	L	S	D	C	.	.	G	Y	A	R	I	E	A	T	S	F	V	S	P	K	W	V	P	Q	L	A	D	S	R	E	V	X	A	G	I	R	R	A	D	G	V	R	Y	S	V	L	V	P	N	.	.	.	.	.	.	.	.	.	X	K	G	Y	E
Template Known Secondary structure		T	S	S	S															T	T	T	.	.	T		S								S		T	T	T		G	G	G	T	T								S				S	S	S							S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.										.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																						.	.	.	.	.																																	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.																																	.	.	.	.	.	.
Query Sequence		A	A	I	A	Y	G	A	D	E	V	D	V	V	F	P	Y	R	A	L	M	.	.	.	.	.	A	G	N	E	Q	V	G	F	D	L	V	K	A	C	K	E	A	C	A	A	A	N	V	L	L	K	V	I	I	E	T	G	.	.	.	.	.	.	E	L	K	D	E	A	L	I	R	K	A	S	E	I	S	I	K
Query Conservation																						.	.	.	.	.																																	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																																	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	P	V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S
Template Known Secondary structure						T	T		S								S									T	S	S																			T	T										S	S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		161	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		A	G	A	D	.	.	F	I	K	T	S	T	G	K	V	A	V	N	A	T	P	E	S	A	R	I	M	M	E	V	I	R	D	M	G	V	E	K	T	V	G	F	K	P	A	G	G	V	R	T	A	E	D	A	Q	K	Y	L	A	I	A	D	E	L	F	G	A	D	W	A	D	A	R	H	Y	R	F	G	A	S
Query Conservation						.	.
Alig confidence						.	.								.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	C	H	E	V	S	L	G	D	T	I	G	.	.	.	.	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	S	L	A	G	H	Y	H	D	T	G	G	R	A	L	D	N	I	R	.	.	.	.	.	.	.	.	.	.	.	V	S	L	E	K	G	L	R	V	F	D	A	S
Template Known Secondary structure			T		S							T	T	S	.	.	.	.																T	T	S		G	G	G						B		T	T	S								.	.	.	.	.	.	.	.	.	.	.						T							B
Template Predicted Secondary structure															.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.												.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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