Job Description P0A6L0 Confidence 94.90% Date Thu Jan 5 11:03:24 GMT 2012 Rank 124 Aligned Residues 132 % Identity 17% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.															.	.	140	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	D	I	D	I	A	L	A	E	T	R	A	A	I	A	Y	G	A	D	E	V	D	V	V	F	P	Y	R	A	L	M	A	G	N	E	Q	V	G	F	D	L	V	K	A	C	K	E	A	C	A	A	A	N	V	L	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	I	E	T	G	E	L
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		D	S	K	P	V	E	E	L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	.	.	.	.	.	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	P	S	G	S	F
Template Known Secondary structure		S		S													G	G	G		S					.	.	.	.	.			T	T	S															T	T			G	G	G					S							T	T	T								T	T	S
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		146	.	.	.	150	.	.	.	.																.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	E	A	L	I	R	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	I	S	I	K	A	G	A	D	F	I	K	T	S	T	G	K	V	A	V	N	A	T	P	E	S	A	R	I	M	M	E	V	I	R	D	M	G	V	E	K	T	V	G	F	K	P	A	G	G	V	R	T	A	E
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.														.	.	.	.	.	.	.											.
Template Conservation						.																																						.	.	.	.														.	.	.	.	.	.	.											.
Template Sequence		S	P	K	Q	.	I	R	A	R	F	P	H	L	H	I	G	R	S	V	H	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	.	.	.	.	R	G	V	S	L	L	S	D	I	K	Q	R	I	.	.	.	.	.	.	.	S	I	P	V	I	A	I	G	G	M	.	T	P	D
Template Known Secondary structure						.						T	T									S										T	T		S									.	.	.	.														.	.	.	.	.	.	.		S						S	S		.		G	G
Template Predicted Secondary structure						.																																						.	.	.	.														.	.	.	.	.	.	.											.
Template SS confidence
		84	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.		.	.	150
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	Q	K	Y	L	A	I	A	D	E	L	F	G	A	D	W	A	D	A	R	H	Y	R	F	G	A	S	S	L	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I
Template Known Secondary structure		G				.	.	.	.	.	.	.	.	.	.	.	.				T	T		S					S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.													.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions